BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB014E11SP1|AL426703
(815 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1543 1562 0.0
>3x_Contig1543
Length = 9648
Score = 1562 bits (781), Expect = 0.0
Identities = 802/815 (98%)
Strand = Plus / Plus
Query: 1 gatccttatggatacggtactgcttattgaattccactgctacagctaaatccacatttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1019 gatccttatggatacggtactgcttattgaattccactgctacagctaaatccacatttt 1078
Query: 61 gttcaggtttgtctatagcaacgctacttgtgatgctctcttgagatatatagaaggtag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1079 gttcaggtttgtctatagcaacgctacttgtgatgctctcttgagatatatagaaggtag 1138
Query: 121 tgtaatgtttcgtcaataaaggtagtattcytaaaatcatcaacycacaaaggtcaacat 180
|||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||
Sbjct: 1139 tgtaatgtttcgtcaataaaggtagtattcttaaaatcatcaactcacaaaggtcaacat 1198
Query: 181 cygagagagcaatcgaaaatcgtattatggcctcttttaacaccgatttcacagtattgg 240
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1199 ctgagagagcaatcgaaaatcgtattatggcctcttttaacaccgatttcacagtattgg 1258
Query: 241 gaaatttgtctgaatcactgattgahccaaaccaggataaaatgaaattgcygatgatgt 300
||||||||||||| ||||||||||| ||||||||||||||||||||||||| ||||||||
Sbjct: 1259 gaaatttgtctgattcactgattgatccaaaccaggataaaatgaaattgctgatgatgt 1318
Query: 301 tattgagtaagamatcaatttcttttgataatgcctcgttattggggaacaaggcttcyt 360
|||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||| |
Sbjct: 1319 tattgagtaagatatcaatttcttttgataatgcttcgttattggggaacaaggcttctt 1378
Query: 361 gaccggcaaaawtatcatcatctgaagttttggtaataggtttatcaccygtgaacctta 420
||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 1379 gaccggcaaaattatcatcatctgaagttttggtaataggtttatcacctgtgaacctta 1438
Query: 421 gcgttggttttgttgggagcacccgaggttgttcatttaatgcaagamatatccaaatga 480
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 1439 gcgttggttttgttgggagcacccgaggttgttcatttaatgcaagatatatccaaatga 1498
Query: 481 ttgacaaaagagacgcaaccgataggacaaacaaacactccccccaccccaagaagaagg 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1499 ttgacaaaagagacgcaaccgataggacaaacaaacactccccccaccccaagaagaagg 1558
Query: 541 gaaccacgaacaaaacatgccacttgaaactgggcatttagaaattcaatatatggactg 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1559 gaaccacgaacaaaacatgccacttgaaactgggcatttagaaattcaatatatggactg 1618
Query: 601 ctgccaatggaatgctgttaagccgcgtcttgggcagtatcttttcgacagtggaataat 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1619 ctgccaatggaatgctgttaagccgcgtcttgggcagtatcttttcgacagtggaataat 1678
Query: 661 ttagcttgtttacactatttgttgaaaaccttgaaatgaactaaatgcgtttaaatcgtc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1679 ttagcttgtttacactatttgttgaaaaccttgaaatgaactaaatgcgtttaaatcgtc 1738
Query: 721 tatctaacgagaatttttatatacaacatgtacgtacaatggagggatgatgctgcmaga 780
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 1739 tatctaacgagaatttttatatacaacatgtacgtacaatggagggatgatgctgcaaga 1798
Query: 781 agaaaataaagagaacatcaatgtgaacttttacg 815
|||||||||||||||||||||||||||||||||||
Sbjct: 1799 agaaaataaagagaacatcaatgtgaacttttacg 1833
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.39 0.712 1.32
Gapped
Lambda K H
1.39 0.712 1.32
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5563
Number of Sequences: 1807
Number of extensions: 5563
Number of successful extensions: 100
Number of sequences better than 1.0e-20: 1
length of query: 815
length of database: 10,358,551
effective HSP length: 16
effective length of query: 799
effective length of database: 10,329,639
effective search space: 8253381561
effective search space used: 8253381561
T: 0
A: 40
X1: 5 (10.0 bits)
X2: 14 (28.0 bits)
S1: 12 (24.5 bits)
S2: 50 (100.5 bits)